Table 1 Differentially expressed genes with differentially methylated peaks
Gene | Transcript ID | Chr | Start | End | m6A regulation | FC | P value | Gene regulation |
|---|---|---|---|---|---|---|---|---|
SAMD11 | ENST00000420190 | chr1 | 924,127 | 924,377 | up | 2.06 | 0.03 | down |
MATN1-AS1 | ENST00000414532 | chr1 | 30,718,928 | 30,719,228 | up | 4.18 | 0.01 | down |
WNT2B | ENST00000256640 | chr1 | 112,514,849 | 112,514,999 | down | -2.06 | 0.05 | down |
NBPF19 | ENST00000369227 | chr1 | 149,475,987 | 149,477,999 | up | 2.69 | 0.01 | up |
CDK18 | ENST00000360066 | chr1 | 205,531,637 | 205,531,737 | up | 4.71 | 0.00 | down |
HNRNPA3P12 | ENST00000437410 | chr1 | 53,975,043 | 53,975,468 | up | 2.09 | 0.00 | down |
PLGLB1 | ENST00000409310 | chr2 | 87,002,683 | 87,002,933 | up | 2.57 | 0.04 | down |
CLDN11 | ENST00000064724 | chr3 | 170,433,423 | 170,433,823 | up | 2.56 | 0.00 | down |
KLHL24 | ENST00000242810 | chr3 | 183,679,819 | 183,679,944 | up | 2.42 | 0.00 | down |
AC111000 | ENST00000505646 | chr4 | 69,214,526 | 69,214,976 | up | 3.06 | 0.01 | down |
LINC00707 | ENST00000436383 | chr10 | 6,779,673 | 6,781,339 | down | -2.25 | 0.01 | up |
MMP13 | ENST00000260302 | chr11 | 102,942,994 | 102,943,219 | down | -2.54 | 0.00 | down |
DNAH10OS | ENST00000514254 | chr12 | 123,928,760 | 123,928,860 | up | 5.27 | 0.00 | down |
ESRRB | ENST00000380887 | chr14 | 76,498,332 | 76,498,707 | up | 2.33 | 0.04 | down |
ALPK3 | ENST00000258888 | chr15 | 84,840,482 | 84,840,607 | down | -3.92 | 0.01 | down |
CLUHP3 | ENST00000562354 | chr16 | 31,709,876 | 31,709,976 | up | 2.89 | 0.02 | down |
MEFV | ENST00000219596 | chr16 | 3,249,553 | 3,249,778 | up | 2.53 | 0.01 | down |
MYADM | ENST00000336967 | chr19 | 53,865,680 | 53,866,060 | down | -2.75 | 0.00 | down |
FER1L4 | ENST00000611673 | chr20 | 35,564,432 | 35,564,557 | up | 2.47 | 0.01 | down |
AC073529 | ENST00000608176 | X | 10,860,095 | 10,860,245 | down | -3.52 | 0.03 | up |