Table 3 Differentially expressed lncRNAs and mRNAs in TB cases with HFYD syndrome
Seqname | GeneSymbol | P-value | Absolute Fold Change | Associated Gene | ||||
|---|---|---|---|---|---|---|---|---|
B vs. control | B vs. A | B vs. C | B vs. control | B vs. A | B vs. C | |||
lncRNA | ||||||||
 TCONS_00008415 | XLOC_003867 | 4.72E-02 | 1.71E-02 | 3.09E-02 | 7.24 | 14.65 | 10.20 | / |
 NR_024499 | FMR1-AS1 | 3.45E-02 | 2.96E-02 | 3.62E-02 | 6.64 | 8.06 | 7.25 | FMR1 |
 ENST00000510610 | RP11-706C16.8 | 1.95E-04 | 1.72E-05 | 2.80E-05 | 4.57 | 6.58 | 6.39 | LY6D |
 ENST00000521600 | PVT1 | 8.03E-03 | 1.69E-03 | 1.88E-02 | 4.11 | 5.83 | 4.95 | / |
 ENST00000448365 | AC078842.4 | 6.88E-03 | 3.39E-03 | 2.75E-03 | 3.09 | 3.25 | 4.11 | PTN |
 uc021pjm.1 | HM358976 | 2.11E-04 | 5.85E-08 | 4.50E-05 | −5.46 | −4.76 | −5.48 | / |
 ENST00000441029 | RP4-553 F4.2 | 4.27E-05 | 9.12E-04 | 4.26E-04 | −3.49 | −3.27 | −4.65 | ZNF341 |
 ENST00000444112 | AC005808.3 | 4.42E-03 | 2.13E-03 | 2.58E-02 | −2.66 | −3.30 | −3.08 | ZNF217 |
 TCONS_00004246 | XLOC_002087 | 7.60E-05 | 1.39E-03 | 3.01E-04 | −4.72 | −3.12 | −3.88 | / |
 ENST00000434072 | GNG12-AS1 | 1.72E-03 | 1.54E-04 | 1.60E-03 | −2.96 | −6.46 | −2.62 | WLS |
mRNA | ||||||||
 NM_001916 | CYC1 | 1.26E-04 | 1.33E-03 | 1.67E-04 | 5.39 | 5.61 | 7.44 | / |
 NM_176869 | PPA2 | 1.44E-02 | 1.67E-02 | 4.48E-02 | 2.70 | 2.02 | 2.06 | / |
 ENST00000418434 | CASP5 | 2.61E-02 | 3.75E-02 | 1.67E-02 | 4.29 | 3.82 | 5.21 | / |
 NM_182609 | ZNF677 | 8.52E-03 | 2.47E-02 | 2.56E-03 | 4.35 | 3.61 | 5.60 | / |
 NM_001135086 | PRSS41 | 3.90E-02 | 1.15E-02 | 4.07E-02 | 4.34 | 9.42 | 4.54 | / |
 NM_207174 | ABCG1 | 4.65E-03 | 2.59E-03 | 3.68E-02 | 6.35 | 8.32 | 4.40 | / |
 NM_001101 | ACTB | 1.95E-03 | 3.10E-04 | 1.99E-03 | −2.45 | −4.22 | −3.09 | / |
 NM_001135575 | C6orf228 | 1.23E-03 | 1.10E-03 | 3.89E-03 | −6.66 | −7.04 | −5.13 | / |
 NM_001166415 | EHHADH | 3.06E-02 | 2.25E-02 | 1.93E-02 | −2.79 | −2.87 | −3.15 | / |
 NM_152496 | MANEAL | 2.40E-02 | 1.28E-02 | 1.36E-02 | −5.78 | −8.54 | −8.88 | / |