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Table 3 Differentially expressed lncRNAs and mRNAs in TB cases with HFYD syndrome

From: Microarray expression profile analysis of mRNAs and long non-coding RNAs in pulmonary tuberculosis with different traditional Chinese medicine syndromes

Seqname GeneSymbol P-value Absolute Fold Change Associated Gene
B vs. control B vs. A B vs. C B vs. control B vs. A B vs. C
lncRNA
 TCONS_00008415 XLOC_003867 4.72E-02 1.71E-02 3.09E-02 7.24 14.65 10.20 /
 NR_024499 FMR1-AS1 3.45E-02 2.96E-02 3.62E-02 6.64 8.06 7.25 FMR1
 ENST00000510610 RP11-706C16.8 1.95E-04 1.72E-05 2.80E-05 4.57 6.58 6.39 LY6D
 ENST00000521600 PVT1 8.03E-03 1.69E-03 1.88E-02 4.11 5.83 4.95 /
 ENST00000448365 AC078842.4 6.88E-03 3.39E-03 2.75E-03 3.09 3.25 4.11 PTN
 uc021pjm.1 HM358976 2.11E-04 5.85E-08 4.50E-05 −5.46 −4.76 −5.48 /
 ENST00000441029 RP4-553 F4.2 4.27E-05 9.12E-04 4.26E-04 −3.49 −3.27 −4.65 ZNF341
 ENST00000444112 AC005808.3 4.42E-03 2.13E-03 2.58E-02 −2.66 −3.30 −3.08 ZNF217
 TCONS_00004246 XLOC_002087 7.60E-05 1.39E-03 3.01E-04 −4.72 −3.12 −3.88 /
 ENST00000434072 GNG12-AS1 1.72E-03 1.54E-04 1.60E-03 −2.96 −6.46 −2.62 WLS
mRNA
 NM_001916 CYC1 1.26E-04 1.33E-03 1.67E-04 5.39 5.61 7.44 /
 NM_176869 PPA2 1.44E-02 1.67E-02 4.48E-02 2.70 2.02 2.06 /
 ENST00000418434 CASP5 2.61E-02 3.75E-02 1.67E-02 4.29 3.82 5.21 /
 NM_182609 ZNF677 8.52E-03 2.47E-02 2.56E-03 4.35 3.61 5.60 /
 NM_001135086 PRSS41 3.90E-02 1.15E-02 4.07E-02 4.34 9.42 4.54 /
 NM_207174 ABCG1 4.65E-03 2.59E-03 3.68E-02 6.35 8.32 4.40 /
 NM_001101 ACTB 1.95E-03 3.10E-04 1.99E-03 −2.45 −4.22 −3.09 /
 NM_001135575 C6orf228 1.23E-03 1.10E-03 3.89E-03 −6.66 −7.04 −5.13 /
 NM_001166415 EHHADH 3.06E-02 2.25E-02 1.93E-02 −2.79 −2.87 −3.15 /
 NM_152496 MANEAL 2.40E-02 1.28E-02 1.36E-02 −5.78 −8.54 −8.88 /
  1. Twenty of the most significantly differentially expressed lncRNAs and mRNA in TB cases with HFYD syndrome compared to healthy controls and TB cases with PYD syndrome and DQY syndrome
  2. Fold change >2: up-regulated; fold change < -2: down-regulated
  3. A: PYD syndrome; B: HFYD syndrome; C: DQY syndrome