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Table 2 Differentially expressed lncRNAs and mRNAs in TB cases with PYD syndrome

From: Microarray expression profile analysis of mRNAs and long non-coding RNAs in pulmonary tuberculosis with different traditional Chinese medicine syndromes

Seqname GeneSymbol P-value Absolute Fold Change Associated Gene
A vs. control A vs. B A vs. C A vs. control A vs. B A vs. C
lncRNA
 ENST00000536029 RP11-392P7.8 3.41E-07 8.50E-04 1.35E-04 47.87 44.37 44.85 GPRC5D
 ENST00000543515 RP11-392P7.8 4.86E-05 1.72E-05 1.43E-04 39.01 44.01 31.53 GPRC5D
 NR_036524 MICA 1.70E-05 1.20E-04 4.19E-05 44.00 36.07 29.72 MICA
 ENST00000467458 RP11-796I2.2 1.48E-05 4.18E-07 1.91E-05 31.88 49.41 43.14 PRKAG2
 uc002mej.1 AK056073 2.89E-06 1.40E-07 1.16E-07 5.28 5.46 5.52 ACSBG2
 TCONS_00002486 XLOC_001036 5.51E-06 1.81E-06 7.44E-04 −5.57 −5.62 −4.58 KCNN3
 DA401339 / 1.76E-04 8.76E-04 4.92E-04 −3.65 −4.94 −5.47 POU3F2
 NR_036569 PILRB 1.73E-05 3.32E-05 1.42E-04 −4.32 −3.77 −4.53 PILRB
 ENST00000458682 LINC00202 1.72E-03 1.94E-03 3.23E-03 −5.12 −5.48 −4.45 /
 ENST00000517670 RP11-363E6.3 5.20E-05 9.24E-03 6.41E-04 −2.66 −2.75 −2.74 FABP5
mRNA
 NM_033641 COL4A6 6.59E-04 1.23E-02 3.81E-05 3.04 3.63 2.76 /
 NM_001079807 PGA3 1.32E-05 1.62E-03 9.73E-06 2.71 2.41 2.86 /
 NM_001079808 PGA4 7.14E-06 2.51E-03 9.10E-05 5.07 5.30 4.12 /
 NM_014224 PGA5 2.76E-06 2.84E-04 1.83E-02 2.88 4.08 2.81 /
 ENST00000412532 SLC1A5 5.62E-03 2.18E-03 8.24E-04 4.78 11.40 8.89 /
 NM_012244 SLC7A8 6.75E-05 2.77E-03 1.52E-03 4.45 4.81 3.47 /
 NM_004174 SLC9A3 5.38E-06 5.64E-06 5.33E-06 4.85 4.81 4.86 /
 NM_199235 COLEC11 3.00E-05 6.87E-04 5.33E-03 −6.77 −2.80 −4.07 /
 NM_020664 DECR2 1.37E-05 7.59E-05 7.84E-04 −3.54 −3.61 −3.76 /
 NM_018248 NEIL3 2.06E-04 8.97E-05 9.04E-05 −2.97 −2.97 −3.28 /
  1. Twenty of the most significantly differentially expressed lncRNAs and mRNAs in TB cases with PYD syndrome compared to healthy controls and TB cases with HFYD syndrome and DQY syndrome
  2. Fold change >2: up-regulated; fold change < -2: down-regulated
  3. A: PYD syndrome; B: HFYD syndrome; C: DQY syndrome