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Table 1 Differentially expressed proteins identified by tandem mass spectrometrya

From: Clarification of the molecular pathway of Taiwan local pomegranate fruit juice underlying the inhibition of urinary bladder urothelial carcinoma cell by proteomics strategy

Spot Protein identity Incidences Experiment pI/MW (kDa) Theoretical pI/MW (kDa) Matchedb peptide number Coverage (%) Accession number (NCBI) Fold
1 ubiquilin 1 (UBQLN1) 5/9 4.8/56.2 5.2/62.5 10 10.34 119583063 +2.73
2 DNA polymerase ε subunit 3 (POLE3) 5/9 4.7/20.2 4.68/16.86 6 32.65 119607787 +7.58
3 eukaryotic translation initiation factor 5A (eIF5A) 6/9 5/19.6 5.07/16.83 4 36.36 119610625 +1.78
4 tumor protein D54 (TPD52L2) 6/9 4.9/29.9 5.26/22.24 8 44.66 11125673 +12.84
5 phosphohistidine phosphatase 1 (PHPT1) 6/9 5.3/17.6 5.65/13.83 2 22.4 11191302 +5.12
6 proteasome inhibitor subunit 1 (PSMF1/PI31) 5/9 5.1/32.3 5.42/29.82 6 25.83 10432572 +3.97
7 B-cell lymphoma/leukemia 10 (BCL 10) 5/9 5.3/31.8 5.57/26.25 3 12.02 119593614 +2.9
8 dUTP pyrophosphatase (DUT) 5/9 5.5/21.2 6.15/17.75 5 42.07 10257385 +6.81
9 prefoldin subunit 5 (PFDN5) 5/9 5.8/19 5.94/17.33 9 57.79 119617089 +2.51
10 peflin (PEF1) 7/9 5.8/30.8 4.84/28.22 7 23.6 119628003 +6.31
11 triosephosphate isomerase 1 (TPI1) 5/9 6.2/28 5.65/30.79 8 39.86 119609128 +6.27
12 26S proteasome non-ATPase regulatory subunit 9 (PSMD9) 5/9 6.3/30.5 6.46/24.68 2 9.42 119618700 +7.17
13 NADH dehydrogenase (ubiquinone) 1 α subcomplex assembly factor 1 (NDUFAF1) 5/9 6.3/34.9 7.11/37.76 4 17.43 119612893 +5.2
14 transgelin 2 (TAGLN2) 5/9 6.9/22.6 8.41/22.39 10 53.27 119573145 +3.2
15 Diablo (DIABLO) 5/9 4.8/21.5 5.67/27.16 10 43.51 10437144 +3.94
16 BCL2-associated athanogene 2 (BAG2) 5/9 5.9/26.3 6.25/23.77 9 43.60 115528700 +4.71
17 translin-associated factor X (TSNAX) 5/9 6.2/33.3 6.10/33.11 8 42.41 119590369 +6.54
18 profilin 1 (PFN1) 5/9 6.8/17.9 8.44/15.05 7 65.00 119610787 +1.57
19 cofilin (CFL1) 5/9 7.0/19.0 8.22/18.50 10 56.02 116848 +2.86
A F-actin-capping protein subunit alpha-1 (CAPZA1) 5/9 5.2/36.8 5.45/32.92 10 41.26 119576929 −1.93
  1. aMatched peptide number: Number of peptides matched with protein in MS/MS query. Coverage: Total percentage of amino acid sequence covered by peptides identified by MS/MS analyses
  2. bThe detail data of MS/MS identification for each peptide was provided in Additional file 2: Table S2, supporting information